SelectTopVolumeBranchesBlock.h

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//============================================================================
 
//============================================================================
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//============================================================================
// Copyright (c) 2018, The Regents of the University of California, through
// Lawrence Berkeley National Laboratory (subject to receipt of any required approvals
// from the U.S. Dept. of Energy).  All rights reserved.
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//=============================================================================
//
//  This code is an extension of the algorithm presented in the paper:
//  Parallel Peak Pruning for Scalable SMP Contour Tree Computation.
//  Hamish Carr, Gunther Weber, Christopher Sewell, and James Ahrens.
//  Proceedings of the IEEE Symposium on Large Data Analysis and Visualization
//  (LDAV), October 2016, Baltimore, Maryland.
//
//  The PPP2 algorithm and software were jointly developed by
//  Hamish Carr (University of Leeds), Gunther H. Weber (LBNL), and
//  Oliver Ruebel (LBNL)
//==============================================================================
 
#ifndef viskores_filter_scalar_topology_internal_SelectTopVolumeBranchesBlock_h
#define viskores_filter_scalar_topology_internal_SelectTopVolumeBranchesBlock_h
 
#include <viskores/cont/DataSet.h>
#include <viskores/filter/scalar_topology/worklet/contourtree_augmented/Types.h>
#include <viskores/filter/scalar_topology/worklet/select_top_volume_branches/BranchDecompositionTreeMaker.h>
#include <viskores/filter/scalar_topology/worklet/select_top_volume_branches/TopVolumeBranchData.h>
 
namespace viskores
{
namespace filter
{
namespace scalar_topology
{
namespace internal
{
 
struct SelectTopVolumeBranchesBlock
{
  SelectTopVolumeBranchesBlock(viskores::Id localBlockNo, int globalBlockId);
 
  // Block metadata
  viskores::Id LocalBlockNo;
  int GlobalBlockId;
 
  // the data class for branch arrays (e.g., branch root global regular IDs, branch volume, etc.)
  TopVolumeBranchData TopVolumeData;
 
  // the factory class to compute the relation of top-volume branches
  BranchDecompositionTreeMaker BDTMaker;
 
  // Destroy function allowing DIY to own blocks and clean them up after use
  static void Destroy(void* b) { delete static_cast<SelectTopVolumeBranchesBlock*>(b); }
 
  // compute the volume of local branches, and sort them by volume
  void SortBranchByVolume(const viskores::cont::DataSet& bdDataSet, const viskores::Id totalVolume);
 
  // choose the top branches by volume
  void SelectLocalTopVolumeBranches(const viskores::cont::DataSet& bdDataSet,
                                    const viskores::Id nSavedBranches);
 
  // compute the branch decomposition tree (implicitly) for top branches
  void ComputeTopVolumeBranchHierarchy(const viskores::cont::DataSet& bdDataSet);
 
  // exclude branches whose volume <= presimplifyThreshold
  viskores::Id ExcludeTopVolumeBranchByThreshold(const viskores::Id presimplifyThreshold);
};
 
} // namespace internal
} // namespace scalar_topology
} // namespace filter
} // namespace viskores
#endif